skip to main content


Search for: All records

Creators/Authors contains: "Johnson, Sherri L."

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Abstract

    Urgency of Precipitation Intensity-Duration-Frequency (IDF) estimation using the most recent data has grown significantly due to recent intense precipitation and cloud burst circumstances impacting infrastructure caused by climate change. Given the continually available digitized up-to-date, long-term, and fine resolution precipitation dataset from the United States Department of Agriculture Forest Service’s (USDAFS) Experimental Forests and Ranges (EF) rain gauge stations, it is both important and relevant to develop precipitation IDF from onsite dataset (Onsite-IDF) that incorporates the most recent time period, aiding in the design, and planning of forest road-stream crossing structures (RSCS) in headwaters to maintain resilient forest ecosystems. Here we developed Onsite-IDFs for hourly and sub-hourly duration, and 25-yr, 50-yr, and 100-yr design return intervals (RIs) from annual maxima series (AMS) of precipitation intensities (PIs) modeled by applying Generalized Extreme Value (GEV) analysis and L-moment based parameter estimation methodology at six USDAFS EFs and compared them with precipitation IDFs obtained from the National Oceanic and Atmospheric Administration Atlas 14 (NOAA-Atlas14). A regional frequency analysis (RFA) was performed for EFs where data from multiple precipitation gauges are available. NOAA’s station-based precipitation IDFs were estimated for comparison using RFA (NOAA-RFA) at one of the EFs where NOAA-Atlas14 precipitation IDFs are unavailable. Onsite-IDFs were then evaluated against the PIs from NOAA-Atlas14 and NOAA-RFA by comparing their relative differences and storm frequencies. Results show considerable relative differences between the Onsite- and NOAA-Atlas14 (or NOAA-RFA) IDFs at these EFs, some of which are strongly dependent on the storm durations and elevation of precipitation gauges, particularly in steep, forested sites of H. J. Andrews (HJA) and Coweeta Hydrological Laboratory (CHL) EFs. At the higher elevation gauge of HJA EF, NOAA-RFA based precipitation IDFs underestimate PI of 25-yr, 50-yr, and 100-yr RIs by considerable amounts for 12-h and 24-h duration storm events relative to the Onsite-IDFs. At the low-gradient Santee (SAN) EF, the PIs of 3- to 24-h storm events with 100-yr frequency (or RI) from NOAA-Atlas14 gauges are found to be equivalent to PIs of more frequent storm events (25–50-yr RI) as estimated from the onsite dataset. Our results recommend use of the Onsite-IDF estimates for the estimation of design storm peak discharge rates at the higher elevation catchments of HJA, CHL, and SAN EF locations, particularly for longer duration events, where NOAA-based precipitation IDFs underestimate the PIs relative to the Onsite-IDFs. This underscores the importance of long-term high resolution EF data for new applications including ecological restorations and indicates that planning and design teams should use as much local data as possible or account for potential PI inconsistencies or underestimations if local data are unavailable.

     
    more » « less
    Free, publicly-accessible full text available October 1, 2024
  2. Abstract Predicting the edges of species distributions is fundamental for species conservation, ecosystem services, and management decisions. In North America, the location of the upstream limit of fish in forested streams receives special attention, because fish-bearing portions of streams have more protections during forest management activities than fishless portions. We present a novel model development and evaluation framework, wherein we compare 26 models to predict upper distribution limits of trout in streams. The models used machine learning, logistic regression, and a sophisticated nested spatial cross-validation routine to evaluate predictive performance while accounting for spatial autocorrelation. The model resulting in the best predictive performance, termed UPstream Regional LiDAR Model for Extent of Trout (UPRLIMET), is a two-stage model that uses a logistic regression algorithm calibrated to observations of Coastal Cutthroat Trout ( Oncorhynchus clarkii clarkii ) occurrence and variables representing hydro-topographic characteristics of the landscape. We predict trout presence along reaches throughout a stream network, and include a stopping rule to identify a discrete upper limit point above which all stream reaches are classified as fishless. Although there is no simple explanation for the upper distribution limit identified in UPRLIMET, four factors, including upstream channel length above the point of uppermost fish, drainage area, slope, and elevation, had highest importance. Across our study region of western Oregon, we found that more of the fish-bearing network is on private lands than on state, US Bureau of Land Mangement (BLM), or USDA Forest Service (USFS) lands, highlighting the importance of using spatially consistent maps across a region and working across land ownerships. Our research underscores the value of using occurrence data to develop simple, but powerful, prediction tools to capture complex ecological processes that contribute to distribution limits of species. 
    more » « less
  3. null (Ed.)
  4. Abstract Aim

    Climate change is broadly affecting phenology, but species‐specific phenological response to temperature is not well understood. In streams, insect emergence has important ecosystem‐level consequences because emergent adults link aquatic and terrestrial food webs. We quantified emergence timing and duration (within‐population synchronicity) of insects among streams along a spatiotemporal gradient of mean water temperature in a montane basin to assess the sensitivity of these phenological traits to heat accumulation from mid‐winter through spring emergence periods.

    Location

    Six headwater streams in the Lookout Creek basin, H.J. Andrews Experimental Forest, Oregon, USA.

    Methods

    We collected emerging adults of four abundant insect species twice weekly throughout spring for 6 consecutive years. We fit Gaussian models to the empirical temporal distributions to characterize peak emergence timing (mean) and duration (days between 5th and 95th percentiles) for each species/stream/year combination. We then quantified relationships between degree‐day accumulation and phenological response.

    Results

    Only one of the four species (a caddisfly) showed a simple response of earlier emergence timing in both warmer streams and years. One stonefly had lengthy emergence periods resulting in substantial phenological overlap between warmer and cooler streams/years. Interestingly, two species (a mayfly and a stonefly) responded strongly to temporal (interannual) temperature differences but minimally to spatial differences, indicating that emergence was nearly synchronous among streams, within years. These two species had among‐stream differences approaching 500 degree‐days from mid‐winter to peak emergence. Conversely, duration of emergence was more strongly associated with spatial than temporal differences, with longer duration in lower‐elevation (warmer) streams.

    Main conclusions

    Emergence phenology has species‐specific responses to temperature likely driven by complex cues for diapause or quiescence periods during preceding life cycle stages. We hypothesize a trade‐off between complex phenological response that synchronizes emergence among heterogeneous sites and other traits such as adult longevity and dispersal capacity.

     
    more » « less
  5. Abstract

    Food webs show the architecture of trophic relationships, revealing the biodiversity and species interactions in an ecosystem. Understanding which factors modulate the structure of food webs offers us the ability to predict how they will change when influential factors are altered. To date, most of the research about food webs has focused on species interactions whereas the influences of surrounding environments have been overlooked. Here, using network analysis, we identified how the structure of aquatic food webs varied across a range of geophysical conditions within a whole stream system. Within a headwater basin in the Cascade Mountain Range, Oregon, USA, macroinvertebrate and vertebrate composition was investigated at 18 sites. Predator–prey interactions were compiled based on existing literature and dietary analysis. Several structural network metrics were calculated for each food web. We show that the structure of food webs was predictable based on geophysical features at both local (i.e., slope) and broader (i.e., basin size) spatial extents. Increased omnivory, greater connectance, shorter path lengths, and ultimately greater complexity and resilience existed downstream compared to upstream in the stream network. Surprisingly, the variation in food web structure was not associated with geographic proximity. Structural metric values and abundance of omnivory suggest high levels of stability for these food webs. There is a predictable variation in the structure of food webs across the network that is influenced by both longitudinal position within streams and patchy discontinuities in habitat. Hence, findings illustrate that the slightly differing perspectives from the River Continuum Concept, Discontinuity Patch Dynamics, and Process Domains can be integrated and unified using food web networks. Our analyses extend ecologists’ understanding of the stability of food webs and are a vital step toward predicting how webs and communities may respond to both natural disturbances and current global environmental change.

     
    more » « less
  6. Abstract

    Atmospheric deposition of dissolved organic carbon (DOC) to terrestrial ecosystems is a small, but rarely studied component of the global carbon (C) cycle. Emissions of volatile organic compounds (VOC) and organic particulates are the sources of atmospheric C and deposition represents a major pathway for the removal of organic C from the atmosphere. Here, we evaluate the spatial and temporal patterns of DOC deposition using 70 data sets at least one year in length ranging from 40° south to 66° north latitude. Globally, the median DOC concentration in bulk deposition was 1.7 mg L−1. The DOC concentrations were significantly higher in tropical (<25°) latitudes compared to temperate (>25°) latitudes. DOC deposition was significantly higher in the tropics because of both higher DOC concentrations and precipitation. Using the global median or latitudinal specific DOC concentrations leads to a calculated global deposition of 202 or 295 Tg C yr−1respectively. Many sites exhibited seasonal variability in DOC concentration. At temperate sites, DOC concentrations were higher during the growing season; at tropical sites, DOC concentrations were higher during the dry season. Thirteen of the thirty‐four long‐term (>10 years) data sets showed significant declines in DOC concentration over time with the others showing no significant change. Based on the magnitude and timing of the various sources of organic C to the atmosphere, biogenic VOCs likely explain the latitudinal pattern and the seasonal pattern at temperate latitudes while decreases in anthropogenic emissions are the most likely explanation for the declines in DOC concentration.

     
    more » « less
  7. Abstract

    Dissolved organic carbon (DOC) and nitrogen (DON) are important energy and nutrient sources for aquatic ecosystems. In many northern temperate, freshwater systems DOC has increased in the past 50 years. Less is known about how changes in DOC may vary across latitudes, and whether changes in DON track those of DOC. Here, we present long‐term DOC and DON data from 74 streams distributed across seven sites in biomes ranging from the tropics to northern boreal forests with varying histories of atmospheric acid deposition. For each stream, we examined the temporal trends of DOC and DON concentrations and DOC:DON molar ratios. While some sites displayed consistent positive or negative trends in stream DOC and DON concentrations, changes in direction or magnitude were inconsistent at regional or local scales. DON trends did not always track those of DOC, though DOC:DON ratios increased over time for ~30% of streams. Our results indicate that the dissolved organic matter (DOM) pool is experiencing fundamental changes due to the recovery from atmospheric acid deposition. Changes in DOC:DON stoichiometry point to a shifting energy‐nutrient balance in many aquatic ecosystems. Sustained changes in the character of DOM can have major implications for stream metabolism, biogeochemical processes, food webs, and drinking water quality (including disinfection by‐products). Understanding regional and global variation in DOC and DON concentrations is important for developing realistic models and watershed management protocols to effectively target mitigation efforts aimed at bringing DOM flux and nutrient enrichment under control.

     
    more » « less
  8. Abstract

    A comprehensive cross‐biome assessment of major nitrogen (N) species that includes dissolved organic N (DON) is central to understanding interactions between inorganic nutrients and organic matter in running waters. Here, we synthesize stream water N chemistry across biomes and find that the composition of the dissolved N pool shifts from highly heterogeneous to primarily comprised of inorganic N, in tandem with dissolved organic matter (DOM) becoming more N‐rich, in response to nutrient enrichment from human disturbances. We identify two critical thresholds of total dissolved N (TDN) concentrations where the proportions of organic and inorganic N shift. With low TDN concentrations (0–1.3 mg/L N), the dominant form of N is highly variable, and DON ranges from 0% to 100% of TDN. At TDN concentrations above 2.8 mg/L, inorganic N dominates the N pool and DON rarely exceeds 25% of TDN. This transition to inorganic N dominance coincides with a shift in the stoichiometry of the DOM pool, where DOM becomes progressively enriched in N and DON concentrations are less tightly associated with concentrations of dissolved organic carbon (DOC). This shift in DOM stoichiometry (defined as DOC:DON ratios) suggests that fundamental changes in the biogeochemical cycles of C and N in freshwater ecosystems are occurring across the globe as human activity alters inorganic N and DOM sources and availability. Alterations to DOM stoichiometry are likely to have important implications for both the fate of DOM and its role as a source of N as it is transported downstream to the coastal ocean.

     
    more » « less
  9. ABSTRACT

    Anthropogenic increases in nitrogen (N) and phosphorus (P) concentrations can strongly influence the structure and function of ecosystems. Even though lotic ecosystems receive cumulative inputs of nutrients applied to and deposited on land, no comprehensive assessment has quantified nutrient‐enrichment effects within streams and rivers. We conducted a meta‐analysis of published studies that experimentally increased concentrations of N and/or P in streams and rivers to examine how enrichment alters ecosystem structure (state: primary producer and consumer biomass and abundance) and function (rate: primary production, leaf breakdown rates, metabolism) at multiple trophic levels (primary producer, microbial heterotroph, primary and secondary consumers, and integrated ecosystem). Our synthesis included 184 studies, 885 experiments, and 3497 biotic responses to nutrient enrichment. We documented widespread increases in organismal biomass and abundance (mean response = +48%) and rates of ecosystem processes (+54%) to enrichment across multiple trophic levels, with no large differences in responses among trophic levels or between autotrophic or heterotrophic food‐web pathways. Responses to nutrient enrichment varied with the nutrient added (N, P, or both) depending on rateversusstate variable and experiment type, and were greater in flume and whole‐stream experiments than in experiments using nutrient‐diffusing substrata. Generally, nutrient‐enrichment effects also increased with water temperature and light, and decreased under elevated ambient concentrations of inorganic N and/or P. Overall, increased concentrations of N and/or P altered multiple food‐web pathways and trophic levels in lotic ecosystems. Our results indicate that preservation or restoration of biodiversity and ecosystem functions of streams and rivers requires management of nutrient inputs and consideration of multiple trophic pathways.

     
    more » « less